Best HRIS Software for Small Businesses With Integrated Payroll

Curated list of the top HRIS solutions that combine human‑resource management and payroll processing, ideal for small businesses looking for an all‑in‑one, affordable system.

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#2 Gusto

All‑in‑one HR, benefits, and payroll platform offering automated tax filing, employee onboarding, and compliance tools.

Comprehensive HR suite with integrated payroll, benefits administration, time‑off tracking, and compliance management.

User‑friendly HRIS focused on employee data, performance, and time‑off, now paired with BambooHR Payroll for seamless pay runs.

Unified platform that syncs HR, IT, and payroll, allowing automatic provisioning of accounts and real‑time payroll processing.

Simplified PEO solution that bundles HR, benefits, compliance, and payroll into a single, easy‑to‑manage dashboard.

#7 OnPay

Straightforward payroll engine with built‑in HR tools for hiring, onboarding, and employee self‑service.

Low‑cost payroll and HR solution designed for small businesses, featuring automated tax filing and basic employee management.

Intuitive payroll service that includes HR basics such as employee records, onboarding, and compliance alerts.

Scalable HR and payroll platform offering time‑tracking, benefits administration, and robust reporting for growing teams.

Full‑featured HR suite with integrated payroll, talent management, and compliance tools, tailored for small to mid‑size firms.

#12 Namely

Modern HRIS that blends payroll, benefits, performance, and compliance into a single, employee‑centric experience.

#13 TriNet

PEO‑style solution delivering HR, payroll, risk mitigation, and benefits administration for small businesses seeking outsourced expertise.

#14 Paylocity

Cloud‑based HR and payroll platform with intuitive self‑service, time‑tracking, and talent acquisition modules.

Affordable HRIS with integrated payroll (via Zoho Payroll), leave management, and performance tracking.

#16 Freshteam

HR software from Freshworks that includes applicant tracking, onboarding, time‑off, and a built‑in payroll add‑on.

Payroll module tightly coupled with Xero accounting, offering employee self‑service, tax filing, and basic HR records.

Payroll solution integrated with QuickBooks Online, providing simple HR tools like employee directory and time‑off tracking.

#19 Sage HRMS

Sage’s small‑business HR suite combines payroll, benefits, and talent management with strong reporting capabilities.

All‑in‑one HR, payroll, and time‑keeping platform designed for small to mid‑size businesses.

#21 PayFit

European‑focused HR and payroll platform offering automated payroll, contract management, and compliance for small firms.